Showing : BSgenome forge • reset
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BSgenomeForge version 1.52.0, error in .TwoBits_export
bsgenome forge twobits_export bioconductor
5.3 years ago bioinagesh • 0
0
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7
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2.0k
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BSgenomeForge error in .TwoBits_export
bsgenome forge TwoBits_export
updated 7.2 years ago by 16k • written 7.2 years ago by • 0
2
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5
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2.5k
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Forge a BSgenome data package
bsgenome bsgenome forge
7.8 years ago • updated 7.4 years ago jodiera • 0
0
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3
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1.3k
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BSGenome problem with forgeBSgenomeDataPkg command
bsgenome forge
8.4 years ago pj dias ▴ 60
3
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2
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1.4k
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CRISPRseek with (rough) Draft Genome
crisprseek grna searching bsgenome forge offtarget analysis
updated 8.5 years ago by 16k • written 8.5 years ago by • 0
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1.4k
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Error from BSgenome forge using .2bit file
BSgenome forge 2bit bsgnome forge 2bit file
updated 9.7 years ago by 16k • written 9.7 years ago by • 0
2
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1.5k
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How do I create BSgenome Bos_taurus_UMD3.1?
bsgenome forge bovine
updated 9.7 years ago by 16k • written 9.7 years ago by • 0
7 results • Page 1 of 1
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Comment: Struggle with the replicates of epic array data by Melisa Tecik • 0
Thanks you so much for the instructions. I also tried M values as you suggested but sadly the result was the same. Apparently, the problem …
Answer: bioconductor packages on bioconda by James W. MacDonald 67k
The bioconda people are responsible for bioconda, so you should ask them if/when they are going to update.
Answer: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome by James W. MacDonald 67k
The default for `plotKaryotype` is to use hg19.
Comment: Is it possible to parallelise saveHDF5SummarizedExperiment by Stefano Mangiola ▴ 20
saveTileDBSummarizedExperiment would be awesome. I think we need performance for execution time and memory required to save.
Comment: Create Illmina bead summary data by Liu • 0
Hi! Yes, thank you! I completely agree. I am just curious about how these two files are processed with AVG_Gre and detection p-value. I am …
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Filtering low variance genes for WGCNA
A: Filtering low variance genes for WGCNA
Answer: Struggle with the replicates of epic array data
Answer: bioconductor packages on bioconda
Appropriate use of the function treat of the limma package
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